Overview
KubeDB is the Kubernetes Native Database Management Solution which simplifies and automates routine database tasks such as Provisioning, Monitoring, Upgrading, Patching, Scaling, Volume Expansion, Backup, Recovery, Failure detection, and Repair for various popular databases on private and public clouds. The databases that KubeDB supports are MySQL, MongoDB, MariaDB, Elasticsearch, Redis, PostgreSQL, ProxySQL, Percona XtraDB, Memcached and PgBouncer. You can find the guides to all the supported databases here . In this tutorial we will deploy and manage Percona XtraDB database in Amazon Elastic Kubernetes Service (Amazon EKS). We will cover the following steps:
- Install KubeDB
- Deploy Percona XtraDB Clustered Database
- Horizontal Scaling of Percona XtraDB Database
- Vertical Scaling of Percona XtraDB Database
Install KubeDB
We will follow the steps to install KubeDB.
Get Cluster ID
We need the cluster ID to get the KubeDB License. To get cluster ID we can run the following command:
$ kubectl get ns kube-system -o jsonpath='{.metadata.uid}'
debacab3-y89q-4168-ba24-e97a553dcfa4
Get License
Go to Appscode License Server to get the license.txt file. For this tutorial we will use KubeDB Enterprise Edition.
Install KubeDB
We will use helm to install KubeDB. Please install helm here
if it is not already installed.
Now, let’s install KubeDB.
$ helm repo add appscode https://charts.appscode.com/stable/
$ helm repo update
$ helm search repo appscode/kubedb
NAME CHART VERSION APP VERSION DESCRIPTION
appscode/kubedb v2022.10.18 v2022.10.18 KubeDB by AppsCode - Production ready databases...
appscode/kubedb-autoscaler v0.14.0 v0.14.0 KubeDB Autoscaler by AppsCode - Autoscale KubeD...
appscode/kubedb-catalog v2022.10.18 v2022.10.18 KubeDB Catalog by AppsCode - Catalog for databa...
appscode/kubedb-community v0.24.2 v0.24.2 KubeDB Community by AppsCode - Community featur...
appscode/kubedb-crds v2022.10.18 v2022.10.18 KubeDB Custom Resource Definitions
appscode/kubedb-dashboard v0.5.0 v0.5.0 KubeDB Dashboard by AppsCode
appscode/kubedb-enterprise v0.11.2 v0.11.2 KubeDB Enterprise by AppsCode - Enterprise feat...
appscode/kubedb-grafana-dashboards v2022.10.18 v2022.10.18 A Helm chart for kubedb-grafana-dashboards by A...
appscode/kubedb-metrics v2022.10.18 v2022.10.18 KubeDB State Metrics
appscode/kubedb-ops-manager v0.16.0 v0.16.2 KubeDB Ops Manager by AppsCode - Enterprise fea...
appscode/kubedb-opscenter v2022.10.18 v2022.10.18 KubeDB Opscenter by AppsCode
appscode/kubedb-provisioner v0.29.0 v0.29.2 KubeDB Provisioner by AppsCode - Community feat...
appscode/kubedb-schema-manager v0.5.0 v0.5.0 KubeDB Schema Manager by AppsCode
appscode/kubedb-ui v2022.06.14 0.3.22 A Helm chart for Kubernetes
appscode/kubedb-ui-server v2021.12.21 v2021.12.21 A Helm chart for kubedb-ui-server by AppsCode
appscode/kubedb-webhook-server v0.5.0 v0.5.0 KubeDB Webhook Server by AppsCode
# Install KubeDB Enterprise operator chart
$ helm install kubedb appscode/kubedb \
--version v2022.10.18 \
--namespace kubedb --create-namespace \
--set kubedb-provisioner.enabled=true \
--set kubedb-ops-manager.enabled=true \
--set kubedb-autoscaler.enabled=true \
--set kubedb-dashboard.enabled=true \
--set kubedb-schema-manager.enabled=true \
--set-file global.license=/path/to/the/license.txt
Let’s verify the installation:
$ watch kubectl get pods --all-namespaces -l "app.kubernetes.io/instance=kubedb"
NAMESPACE NAME READY STATUS RESTARTS AGE
kubedb kubedb-kubedb-autoscaler-8486d9954-p2kjd 1/1 Running 0 4m6s
kubedb kubedb-kubedb-dashboard-7d8df6d5d6-mxjs6 1/1 Running 0 4m6s
kubedb kubedb-kubedb-ops-manager-6bbcb4b77b-lh2db 1/1 Running 0 4m6s
kubedb kubedb-kubedb-provisioner-575cb86d84-qqfch 1/1 Running 0 4m6s
kubedb kubedb-kubedb-schema-manager-797cb7c485-fpff9 1/1 Running 0 4m6s
kubedb kubedb-kubedb-webhook-server-5998fd668-wtwch 1/1 Running 0 4m6s
We can list the CRD Groups that have been registered by the operator by running the following command:
$ kubectl get crd -l app.kubernetes.io/name=kubedb
NAME CREATED AT
elasticsearchautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:33Z
elasticsearchdashboards.dashboard.kubedb.com 2022-11-15T10:47:32Z
elasticsearches.kubedb.com 2022-11-15T10:47:33Z
elasticsearchopsrequests.ops.kubedb.com 2022-11-15T10:47:36Z
elasticsearchversions.catalog.kubedb.com 2022-11-15T10:35:35Z
etcds.kubedb.com 2022-11-15T10:47:36Z
etcdversions.catalog.kubedb.com 2022-11-15T10:35:36Z
mariadbautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:33Z
mariadbdatabases.schema.kubedb.com 2022-11-15T10:47:40Z
mariadbopsrequests.ops.kubedb.com 2022-11-15T10:47:53Z
mariadbs.kubedb.com 2022-11-15T10:47:37Z
mariadbversions.catalog.kubedb.com 2022-11-15T10:35:37Z
memcacheds.kubedb.com 2022-11-15T10:47:37Z
memcachedversions.catalog.kubedb.com 2022-11-15T10:35:38Z
mongodbautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:33Z
mongodbdatabases.schema.kubedb.com 2022-11-15T10:47:35Z
mongodbopsrequests.ops.kubedb.com 2022-11-15T10:47:39Z
mongodbs.kubedb.com 2022-11-15T10:47:36Z
mongodbversions.catalog.kubedb.com 2022-11-15T10:35:38Z
mysqlautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:34Z
mysqldatabases.schema.kubedb.com 2022-11-15T10:47:34Z
mysqlopsrequests.ops.kubedb.com 2022-11-15T10:47:50Z
mysqls.kubedb.com 2022-11-15T10:47:34Z
mysqlversions.catalog.kubedb.com 2022-11-15T10:35:40Z
perconaxtradbautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:34Z
perconaxtradbopsrequests.ops.kubedb.com 2022-11-15T10:48:08Z
perconaxtradbs.kubedb.com 2022-11-15T10:47:44Z
perconaxtradbversions.catalog.kubedb.com 2022-11-15T10:35:41Z
pgbouncers.kubedb.com 2022-11-15T10:47:44Z
pgbouncerversions.catalog.kubedb.com 2022-11-15T10:35:41Z
postgresautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:34Z
postgresdatabases.schema.kubedb.com 2022-11-15T10:47:38Z
postgreses.kubedb.com 2022-11-15T10:47:38Z
postgresopsrequests.ops.kubedb.com 2022-11-15T10:48:01Z
postgresversions.catalog.kubedb.com 2022-11-15T10:35:42Z
proxysqlopsrequests.ops.kubedb.com 2022-11-15T10:48:05Z
proxysqls.kubedb.com 2022-11-15T10:47:45Z
proxysqlversions.catalog.kubedb.com 2022-11-15T10:35:43Z
publishers.postgres.kubedb.com 2022-11-15T10:48:14Z
redisautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:34Z
redises.kubedb.com 2022-11-15T10:47:46Z
redisopsrequests.ops.kubedb.com 2022-11-15T10:47:57Z
redissentinelautoscalers.autoscaling.kubedb.com 2022-11-15T10:47:34Z
redissentinelopsrequests.ops.kubedb.com 2022-11-15T10:48:11Z
redissentinels.kubedb.com 2022-11-15T10:47:46Z
redisversions.catalog.kubedb.com 2022-11-15T10:35:44Z
subscribers.postgres.kubedb.com 2022-11-15T10:48:18Z
Deploy Percona XtraDB Clustered Database
Now, we are going to Deploy Percona XtraDB with the help of KubeDB. First, let’s create a Namespace in which we will deploy the database.
$ kubectl create ns demo
namespace/demo created
Here is the yaml of the Percona XtraDB CRO we are going to use:
apiVersion: kubedb.com/v1alpha2
kind: PerconaXtraDB
metadata:
name: percona-cluster
namespace: demo
spec:
version: "8.0.28"
replicas: 3
storageType: Durable
storage:
storageClassName: "gp2"
accessModes:
- ReadWriteOnce
resources:
requests:
storage: 500Mi
terminationPolicy: WipeOut
Let’s save this yaml configuration into percona-cluster.yaml
Then create the above Percona XtraDB CRO
$ kubectl apply -f percona-cluster.yaml
perconaxtradb.kubedb.com/percona-cluster created
- In this yaml we can see in the
spec.versionfield specifies the version of Percona XtraDB. Here, we are using Percona XtraDBversion 8.0.28. You can list the KubeDB supported versions of Percona XtraDB by running$ kubectl get perconaxtradbversionscommand. spec.storagespecifies PVC spec that will be dynamically allocated to store data for this database. This storage spec will be passed to the StatefulSet created by KubeDB operator to run database pods. You can specify any StorageClass available in your cluster with appropriate resource requests.- And the
spec.terminationPolicyfield is Wipeout means that the database will be deleted without restrictions. It can also be “Halt”, “Delete” and “DoNotTerminate”. Learn More about these HERE .
Once these are handled correctly and the Percona XtraDB object is deployed, you will see that the following objects are created:
$ kubectl get all -n demo
NAME READY STATUS RESTARTS AGE
pod/percona-cluster-0 2/2 Running 0 4m34s
pod/percona-cluster-1 2/2 Running 0 4m34s
pod/percona-cluster-2 2/2 Running 0 4m34s
NAME TYPE CLUSTER-IP EXTERNAL-IP PORT(S) AGE
service/percona-cluster ClusterIP 10.100.22.202 <none> 3306/TCP 4m37s
service/percona-cluster-pods ClusterIP None <none> 3306/TCP 4m37s
NAME READY AGE
statefulset.apps/percona-cluster 3/3 4m41s
NAME TYPE VERSION AGE
appbinding.appcatalog.appscode.com/percona-cluster kubedb.com/perconaxtradb 8.0.28 4m44s
NAME VERSION STATUS AGE
perconaxtradb.kubedb.com/percona-cluster 8.0.28 Ready 5m17s
Let’s check if the database is ready to use,
$ kubectl get perconaxtradb -n demo percona-cluster
NAME VERSION STATUS AGE
percona-cluster 8.0.28 Ready 6m7s
We have successfully deployed Percona XtraDB in Amazon EKS. Now we can exec into the container to use the database.
Accessing Database Through CLI
To access the database through CLI, we have to get the credentials to access.
KubeDB will create Secret and Service for the database percona-cluster that we have deployed. Let’s check them using the following commands,
$ kubectl get secret -n demo -l=app.kubernetes.io/instance=percona-cluster
NAME TYPE DATA AGE
percona-cluster-auth kubernetes.io/basic-auth 2 6m53s
percona-cluster-monitor kubernetes.io/basic-auth 2 6m53s
percona-cluster-replication kubernetes.io/basic-auth 2 6m53s
$ kubectl get service -n demo -l=app.kubernetes.io/instance=percona-cluster
NAME TYPE CLUSTER-IP EXTERNAL-IP PORT(S) AGE
percona-cluster ClusterIP 10.100.22.202 <none> 3306/TCP 7m26s
percona-cluster-pods ClusterIP None <none> 3306/TCP 7m26s
Now, we are going to use percona-cluster-auth to get the credentials.
$ kubectl get secrets -n demo percona-cluster-auth -o jsonpath='{.data.username}' | base64 -d
root
$ kubectl get secrets -n demo percona-cluster-auth -o jsonpath='{.data.password}' | base64 -d
KWTPi3Dgibp(OsEU
Insert Sample Data
In this section, we are going to login into our Percona XtraDB database pod and insert some sample data.
$ kubectl exec -it percona-cluster-0 -n demo -c perconaxtradb -- bash
bash-4.4$ mysql --user=root --password='KWTPi3Dgibp(OsEU'
Welcome to the MySQL monitor. Commands end with ; or \g.
Copyright (c) 2009-2022 Percona LLC and/or its affiliates
Copyright (c) 2000, 2022, Oracle and/or its affiliates.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
mysql> CREATE DATABASE Music;
Query OK, 1 row affected (0.01 sec)
mysql> SHOW DATABASES;
+--------------------+
| Database |
+--------------------+
| Music |
| information_schema |
| kubedb_system |
| mysql |
| performance_schema |
| sys |
+--------------------+
6 rows in set (0.01 sec)
mysql> CREATE TABLE Music.Artist (id INT(6) UNSIGNED AUTO_INCREMENT PRIMARY KEY, Name VARCHAR(50), Song VARCHAR(25));
Query OK, 0 rows affected, 1 warning (0.03 sec)
mysql> INSERT INTO Music.Artist (Name, Song) VALUES ("Bobby Bare", "500 Miles Away From Home");
Query OK, 1 row affected (0.01 sec)
mysql> SELECT * FROM Music.Artist;
+----+------------+--------------------------+
| id | Name | Song |
+----+------------+--------------------------+
| 1 | Bobby Bare | 500 Miles Away From Home |
+----+------------+--------------------------+
1 row in set (0.00 sec)
mysql> exit
Bye
We’ve successfully inserted some sample data to our database. More information about Run & Manage Production-Grade Percona XtraDB Database on Kubernetes can be found HERE
Horizontal Scaling of Percona XtraDB Cluster
Scale Up Replicas
Here, we are going to scale up the replicas of the Percona XtraDB cluster replicaset to meet the desired number of replicas after scaling.
Before applying Horizontal Scaling, let’s check the current number of replicas,
$ kubectl get perconaxtradb -n demo percona-cluster -o json | jq '.spec.replicas'
3
Let’s connect to a Percona XtraDB instance and run this command to check the number of replicas,
$ kubectl exec -it percona-cluster-0 -n demo -c perconaxtradb -- bash
bash-4.4$ mysql --user=root --password='KWTPi3Dgibp(OsEU'
Welcome to the MySQL monitor. Commands end with ; or \g.
Copyright (c) 2009-2022 Percona LLC and/or its affiliates
Copyright (c) 2000, 2022, Oracle and/or its affiliates.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
mysql> SHOW STATUS LIKE 'wsrep_cluster_size';
+--------------------+-------+
| Variable_name | Value |
+--------------------+-------+
| wsrep_cluster_size | 3 |
+--------------------+-------+
1 row in set (0.00 sec)
mysql> exit
Bye
Create PerconaXtraDBOpsRequest
In order to scale up the replicas of the replicaset of the database, we have to create a PerconaXtraDBOpsRequest CR with our desired replicas. Let’s create it using this following yaml,
apiVersion: ops.kubedb.com/v1alpha1
kind: PerconaXtraDBOpsRequest
metadata:
name: horizontal-scale-up
namespace: demo
spec:
type: HorizontalScaling
databaseRef:
name: percona-cluster
horizontalScaling:
member : 5
Here,
spec.databaseRef.namespecifies that we are performing horizontal scaling operation onpercona-clusterdatabase.spec.typespecifies that we are performingHorizontalScalingon our database.spec.horizontalScaling.memberspecifies the desired replicas after scaling.
Let’s save this yaml configuration into horizontal-scale-up.yaml and apply it,
$ kubectl apply -f horizontal-scale-up.yaml
perconaxtradbopsrequest.ops.kubedb.com/horizontal-scale-up created
Let’s wait for PerconaXtraDBOpsRequest STATUS to be Successful. Run the following command to watch PerconaXtraDBOpsRequest CR,
$ watch kubectl get perconaxtradbopsrequest -n demo
NAME TYPE STATUS AGE
horizontal-scale-up HorizontalScaling Successful 2m41s
We can see from the above output that the PerconaXtraDBOpsRequest has succeeded. Now, we are going to verify the number of replicas,
$ kubectl get perconaxtradb -n demo percona-cluster -o json | jq '.spec.replicas'
5
Let’s connect to a Percona XtraDB instance and run this command to check the number of replicas,
$ kubectl exec -it percona-cluster-0 -n demo -c perconaxtradb -- bash
bash-4.4$ mysql --user=root --password='KWTPi3Dgibp(OsEU'
Welcome to the MySQL monitor. Commands end with ; or \g.
Copyright (c) 2009-2022 Percona LLC and/or its affiliates
Copyright (c) 2000, 2022, Oracle and/or its affiliates.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
mysql> SHOW STATUS LIKE 'wsrep_cluster_size';
+--------------------+-------+
| Variable_name | Value |
+--------------------+-------+
| wsrep_cluster_size | 5 |
+--------------------+-------+
1 row in set (0.00 sec)
mysql> exit
Bye
From all the above outputs we can see that the replicas of the cluster is now increased to 5. That means we have successfully scaled up the replicas of the Percona XtraDB replicaset.
Scale Down Replicas
Here, we are going to scale down the replicas of the cluster to meet the desired number of replicas after scaling.
Create PerconaXtraDBOpsRequest
In order to scale down the cluster of the database, we need to create a PerconaXtraDBOpsRequest CR with our desired replicas. Let’s create it using this following yaml,
apiVersion: ops.kubedb.com/v1alpha1
kind: PerconaXtraDBOpsRequest
metadata:
name: horizontal-scale-down
namespace: demo
spec:
type: HorizontalScaling
databaseRef:
name: percona-cluster
horizontalScaling:
member : 3
Here,
spec.databaseRef.namespecifies that we are performing horizontal scaling operation onpercona-clusterdatabase.spec.typespecifies that we are performingHorizontalScalingon our database.spec.horizontalScaling.memberspecifies the desired replicas after scaling.
Let’s save this yaml configuration into horizontal-scale-down.yaml and apply it,
$ kubectl apply -f horizontal-scale-down.yaml
perconaxtradbopsrequest.ops.kubedb.com/horizontal-scale-down created
Let’s wait for PerconaXtraDBOpsRequest STATUS to be Successful. Run the following command to watch PerconaXtraDBOpsRequest CR,
$ watch kubectl get perconaxtradbopsrequest -n demo
NAME TYPE STATUS AGE
horizontal-scale-down HorizontalScaling Successful 2m6s
We can see from the above output that the PerconaXtraDBOpsRequest has succeeded. Now, we are going to verify the number of replicas,
$ kubectl get perconaxtradb -n demo percona-cluster -o json | jq '.spec.replicas'
3
Let’s connect to a Percona XtraDB instance and run this command to check the number of replicas,
$ kubectl exec -it percona-cluster-0 -n demo -c perconaxtradb -- bash
bash-4.4$ mysql --user=root --password='KWTPi3Dgibp(OsEU'
Welcome to the MySQL monitor. Commands end with ; or \g.
Copyright (c) 2009-2022 Percona LLC and/or its affiliates
Copyright (c) 2000, 2022, Oracle and/or its affiliates.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
mysql> SHOW STATUS LIKE 'wsrep_cluster_size';
+--------------------+-------+
| Variable_name | Value |
+--------------------+-------+
| wsrep_cluster_size | 3 |
+--------------------+-------+
1 row in set (0.00 sec)
mysql> exit
Bye
From all the above outputs we can see that the replicas of the cluster is decreased to 3. That means we have successfully scaled down the replicas of the Percona XtraDB replicaset.
Vetical Scaling of Percona XtraDB Cluster
Here, we are going to scale up the current cpu resource of the Percona XtraDB cluster by applying Vertical Scaling. Before applying it, let’s check the current resources,
$ kubectl get pod -n demo percona-cluster-0 -o json | jq '.spec.containers[].resources'
{
"limits": {
"memory": "1Gi"
},
"requests": {
"cpu": "500m",
"memory": "1Gi"
}
}
Create PerconaXtraDBOpsRequest
In order to update the resources of the database, we have to create a PerconaXtraDBOpsRequest CR with our desired resources. Let’s create it using this following yaml,
apiVersion: ops.kubedb.com/v1alpha1
kind: PerconaXtraDBOpsRequest
metadata:
name: vertical-scale
namespace: demo
spec:
type: VerticalScaling
databaseRef:
name: percona-cluster
verticalScaling:
perconaxtradb:
requests:
memory: "1.5Gi"
cpu: "0.7"
limits:
memory: "1.5Gi"
cpu: "0.7"
Here,
spec.databaseRef.namespecifies that we are performing vertical scaling operation onpercona-clusterdatabase.spec.typespecifies that we are performingVerticalScalingon our database.spec.VerticalScaling.perconaxtradbspecifies the desired resources after scaling.
Let’s save this yaml configuration into vertical-scale.yaml and apply it,
$ kubectl apply -f vertical-scale.yaml
perconaxtradbopsrequest.ops.kubedb.com/vertical-scale created
Let’s wait for PerconaXtraDBOpsRequest STATUS to be Successful. Run the following command to watch PerconaXtraDBOpsRequest CR,
$ kubectl get perconaxtradbopsrequest -n demo
NAME TYPE STATUS AGE
vertical-scale VerticalScaling Successful 3m
We can see from the above output that the PerconaXtraDBOpsRequest has succeeded. Now, we are going to verify from one of the Pod yaml whether the resources of the database has updated to meet up the desired state. Let’s check with the following command,
$ kubectl get pod -n demo percona-cluster-0 -o json | jq '.spec.containers[].resources'
{
"limits": {
"cpu": "700m",
"memory": "1536Mi"
},
"requests": {
"cpu": "700m",
"memory": "1536Mi"
}
}
The above output verifies that we have successfully scaled up the resources of the Percona XtraDB database.
We have made an in depth tutorial on Managing Percona XtraDB Cluster Day-2 Operations by using KubeDB. You can have a look into the video below:
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